Sonarr importing only parts of files

Sonarr version (exact version): 3.0.6.1342
Mono version (if Sonarr is not running on Windows): 6.8.0.105
OS: Ubuntu 20.04

So this is probably related to my admittedly janky setup but I can’t really think of a solution.
I have a local server in my home network running Plex, Sonarr and Radarr and a rented seedbox doing my dirty work. On my home server my large HDD is mounted to /media/plex and I have a folder on the seedbox mounted via sshfs to /media/downloads. I have Sonarr set to copy and rename the files from /media/downloads to /media/plex/series/[Series Subfolder]. Occasionally the files that end up imported are quite a bit smaller than the downloaded files and playback cuts off at a certain point. This mostly happens with larger files, I haven’t seen it yet on ~300MB episodes but it’s pretty consistent on files over 1GB. This is a pretty new setup so I don’t necessarily need a fix, any pointers on how to achieve my setup (seedbox independent from media server) would also be appreciated.
Thank you!

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